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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1146648 chr1:76265890 A/G OR6C3 chr12:55725485-55726420:+ -0.82 -8.72 9.43E-12 Box Plot
ACC rs1146649 chr1:76268803 A/G OR6C3 chr12:55725485-55726420:+ -0.93 -8.53 1.89E-11 Box Plot
ACC rs1146652 chr1:76273708 A/G OR6C3 chr12:55725485-55726420:+ -0.91 -8.4 2.97E-11 Box Plot
ACC rs114998457 chr17:32521272 C/A TFDP3 chrX:132350697-132352376:- 0.99 8.59 1.52E-11 Box Plot
ACC rs115046919 chr6:25380831 A/G TFDP3 chrX:132350697-132352376:- 0.94 10.27 4.12E-14 Box Plot
ACC rs115201118 chr3:128552140 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs115221473 chr3:128547136 T/G OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs115356727 chr3:128558380 G/A OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs115376271 chr18:37101046 T/C PRHOXNB chr13:28552243-28562774:- 0.7 9.18 1.85E-12 Box Plot
ACC rs115446439 chr4:66237981 G/T CACNG5 chr17:64831235-64881603:+ 1.18 7.86 2.09E-10 Box Plot
ACC rs115448143 chr11:20254929 C/T PRAMEF6 chr1:12998302-13007406:- 0.57 8.33 3.8E-11 Box Plot
ACC rs115639732 chr3:128555607 C/T OR5V1 chr6:29323007-29399744:- 0.68 8.83 6.4E-12 Box Plot
ACC rs11578425 chr1:167885545 A/C PRHOXNB chr13:28552243-28562774:- 0.58 7.7 3.84E-10 Box Plot
ACC rs11578481 chr1:167879655 T/G PRHOXNB chr13:28552243-28562774:- 0.58 7.71 3.67E-10 Box Plot
ACC rs115793493 chr17:51933546 A/G PRHOXNB chr13:28552243-28562774:- 0.53 7.52 7.3E-10 Box Plot